A general theoretical approach to the study of advective effects on biological oceanographic dynamics is formulated and some simple examples are presented. The theory of characteristics provides a model which rigorously combines aspects of local biological dynamics with consideration of fluid particle flow along Lagrangian trajectories. A local kinematical analysis is carried out for gradients both of velocity and of biological state variables. This is followed by a study of the effects of a stretching deformation, which contains a frontogenetic effect, on one to three component biological systems. Problems include the approach to local biological equilibria and the stabilities of the equilibrium states; the competition between biological and advective equilibria; and nonlinear grazing processes and nutrient utilization.
Biological dynamics in the sea involves interactions among physical, biological and chemical processes and coupled processes. A multitude of scales and phenomena are involved, many of which are as yet unknown. Research in interdisciplinary theory and modeling is accelerating, and relevant studies range from idealized isolated process studies to attempts at simulating complex and realistic oceanic dynamics. Concomitantly biological dynamical studies are carried out in zero, one, two and three spatial dimensions. One aspect of the interpretation of some zero-dimensional studies involves the concept of local biological dynamics and equilibria. In such cases the physics may be assumed to be unimportant or may be parameterized by scale-separation hypotheses.
Physical processes which influence the biology consists of physiological effects such as temperature-dependent processes, diffusion and mixing, and advection. Physical processes may compete with or enhance biological processes. Advective effects, which are perhaps least well understood theoretically, are isolated as the focus of the present study. Advection involves the movement of biological material via the physical flow field. Vertical and horizontal velocities transport and entrap dissolved and particulate matter over multiple scales in space and time. A large variety of relevant phenomenological flow structures occur in the ocean, and their associated advective effects may be best treated deterministically or statistically.
The present study adopts an idealized general theoretical approach to the study of advective effects. The attempt is to identify and expose some basic processes which may aid in the interpretation of simulations and which may form the basis of further more realistic studies. The focus is primarily upon the influence of a deformation gradient in the flow field on a dynamically active tracer field, and the results may have some general applications to e.g. chemical and engineering dynamics. The general model, which can be related to zero-dimensional biological dynamics and fluid particle trajectories, is introduced in §2. Sections 3, 4 and 5 subsequently deal, respectively, with advective, biological and interactive processes. Section 6 summarizes and concludes.
(a) Formulation
Consider an n-component biological system with the state variables
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The advective derivative in Cartesian coordinates is
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The advective derivative D/Dt, as given by equation (2.4a), represents the time rate of change of fi following the fluid motion, but expressed in the Eulerian viewpoint for a space-time field (equation (2.1)) at a fixed point in the flow (Lamb, 1932, Chapter 1; Batchelor, 1967, Chapter 2). From the Lagrangian viewpoint, i.e., following tagged fluid particles along finite trajectories, zero-dimensional biological dynamics is simply occurring within each particle. Equation (2.4b) presents an alternative useful interpretation of the advective process at a fixed Eulerian point from a flux viewpoint. Taking into account all processes which act as effective sources (or sinks), equations (2.2) and (2.3) are simply point-wise statements of the conservation of fi. The local advective flux (units of mass per unit area per unit time -ml-2t-1) is
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Figure 1. At the fixed point (x,y,z) the net difference of rate of inflow and outflow of f through the six faces tends to change the amount of f within the infinitesimal volume.
In the present study we will restrict ourselves to two
(spatial) dimensional flows, whence continuity implies the
existence of a stream function y(x,y,t) such that
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It will be convenient to express the model in both dimensional (2.10a) and nondimensional (2.10b) forms. For the latter case: the fi will all be scaled by a representative mass density M; time by t0; distance by L; and speed by u0. Since the context will be clear, we will use identical symbols for both the dimensional and nondimensional versions for the dependent and independent variables. Thus the final model takes the forms
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The left-hand side alone represents local time change plus the advection of the scalar field and the right-hand side alone, the ``zero-dimensional'' local biological dynamics. In general, scalar fields are characterized as passive or active depending upon whether or not they influence the flow field, and inert or dynamical depending upon whether they are simply advected or have sources and sinks due, e.g., to radioactivity, chemical reactions or biological activity.
A version of the parameter a (denoted S) based upon the growth rate t0 = ai0-1 was first identified by Obrien and Wroblewski (1973) as an appropriate measure of advective effects. Platt and Denman (1975) and Platt et al. (1977) scaled a general biomass equation and estimated ranges of relative ratios from data available at that time, which are generally still relevant. A useful quantitative overview of the nondimensional approach is also presented by Wroblewski (1983). A recent example of a nondimensional analysis of scale-dependent physical and biological processes governing the distribution and variability of biomass for a particular species is provided by Horne and Schneider (1994).
(b) Solution
Equations (2.10) are a set of n-coupled first-order partial differential equations. Since the left-hand sides are linear in the fi, and are identical operators on each of the fi, it is a quasilinear set with the same principal parts which can be solved symbolically via the method of characteristics (Courant and Hilbert, 1989; Chapter II, Appendix I). Consider a solution given in terms of a parametric variable s in the form
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The parametric initial value problem specifies data, without loss of generality, at s = 0. The initial values of all the variables are to be specified in terms of two additional parametric variables (r,q), since there are three independent variables in each of equations (2.10a,b). We designate
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The structure of the formal solution of the preceding paragraph is dynamically interesting and provides a valuable framework for interpreting coupled biological and physical processes. Advective processes appear in (2.12a) directly in terms of the Lagrangian trajectory equations but in the s-domain. Similarly, the zero-dimensional biological dynamics appear in the s-domain in eq. (2.12b). A special but important class of problems involves the specification of initial fields in the time domain, i.e., at t = 0. The first of (2.12a) is always directly integrable to t = s+a(r,q), and for this special case we have a = 0, s = t. Now (2.12b) is the local biological dynamics, but the local ``biological equilibrium'' (2.15a) can be altered significantly by the advective effects through r,q as given by (2.14b).
To illustrate the solution procedure, we consider the simplest example of the exponential (Malthusian) growth of phytoplankton (fi) with unlimited light and nutrient in the presence of a spatially uniform and constant velocity field (u0,vo). We seek the time evolution of an initial spatial distribution of f. Equations (2.12a,b) with reference to (2.10a) become
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An alternative formulation of the model in terms of the stream function defined in equation (3.2) can be useful. We consider a time-independent stream function y(x,y) as an independent variable and seek fi(y,y,t). Since
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In this section we consider solutions to eqs. (2.10, 2.12) with Bi = 0 and (u,v) specified, i.e., the advection of a passive inert scalar. Even under these simplifications, analytical solutions for the trajectories are difficult and the flow of a tracer patch can be quite complex due to the stretching and folding of an initial distribution. Even smooth flows can give rise to chaotic advection (Ottino; 1989, 1990). Interesting examples of the complex trajectories that occur in oceanic mesoscale waves and coherent vortices are presented by Flierl (1981) and Dewar and Flierl (1985).
(a) Local analysis
Consider the initial value problem in the time domain. To provide some general insight we expand both an initial scalar tracer field and the advecting velocity in Taylor series in the neighborhood of the point (0,0). Since the tracer fields are inert and uncoupled we drop the subscript i. Thus
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Insight into basic advective processes can be gained by a decomposition of the velocity gradient into its fundamental kinematic parts: divergence (x), stretching deformation (n), vorticity (w), shearing deformation (m)
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Figure 2. Fundamental kinematic components of a velocity gradient: (a) divergence; (b) stretching deformation; (c) vorticity; (d) shearing deformation.
To illustrate the effects of vorticity we set u1 = 0 and
u2 = -v1, whence
w = 2v1. Then g is imaginary and
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To illustrate the effects of deformation we set v1 = u2 = 0; and the solution is now
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(b) Frontogenesis
The role of deformation fields as a ``trigger'' mechanism for the generation of physical fronts in the atmosphere, or the signal that frontogenesis is occurring has been known for some time (Bergeron, 1928; Petterson, 1935). The analogous mechanisms is known to act as a causal mechanism for frontogenesis in the oceans (Simpson and James, 1986). Oceanic fronts have been identified as locations of intensified biological activity because of frontal upwelling of nutrients. It should also be recognized that the processes that cause strong physical gradients of e.g. temperature, will also tend directly to concentrate and cause strong gradients of biological and chemical tracers, i.e., to generate biological fronts. Convergence (regions of negative x) is also a frontogenetic kinematic mechanism, but the thin aspect ratios of the atmosphere and ocean (depth much less than horizontal scales) render them almost horizontally nondivergent and the process is less important.
Saucier (1953) describes a classical meteorological method for analyzing the tendency for frontogenesis from the horizontal deformation of wind fields. The angle (q) required for rotation of the axes into principal axes, and the resultant principal stretching deformation (np) are given by
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(c) Oceanic gradients
Relatively intense gradients occur in the deep and coastal oceans associated with a variety of scales of motion, phenomena, and internal and external driving mechanisms. Permanent fronts separate water masses and give rise to intense boundary and free jets. Permanent convergence zones exist in the equatorial, subtropical and polar oceans. Water mass driven, wind-driven, and tidally driven fronts occur at and across shelf breaks, in the coastal ocean and in the vicinity of banks. Internal dynamical processes (e.g., instabilities, nonlinear and topographic interactions) populate the ocean with frontal ring vortices, eddies, and lenses over a range of meso- and submeso-scales. Such fronts and eddies must be expected to produce biological fronts and interactions and to influence biological dynamics. Biological and physical interactions for some types of fronts, have been and are being studied, such as: eastern boundary upwelling systems (Barber and Smith, 1981), cold and warm core Gulf Stream rings (The Ring Group, 1981; Olson and Backus, 1985; Franks et al., 1986); tidal fronts (Lynch et al., 1995); and eddy-eddy interactions (McGillicuddy et al., 1995). Others have only recently been discovered or understood and await interdisciplinary research.
A theoretical study (Kirwan et al., 1994) of aspects of nonlinear ocean dynamics is based in part on the local kinematics of horizontal divergence (x), deformation (n) and vorticity (w). Waves eddies and submesoscale lens are considered under various dynamical assumptions. Further and broader studies based in the kinematic approach can be useful to the theory of advective effects in biological dynamics. A number of relevant field studies have been carried out attempting to measure directly the kinematic quantities from the dispersion of float clusters. Inference of x, n and w is quantitatively difficult and usually sensitive (Kirwan et al., 1988, 1992). A recent study (Sanderson, 1995) was carried out on the Western Bank of the Scotian Shelf in which the drifters were part of a measurement and modeling system to track cod larvae (Bowen et al., 1995). The estimates, considered sensitive, were
w = (-1.9±0.06)×10-5 s-1, x = (-9.5±7)×10-7 s-1,
n = (9.0±7)×10-7 s-1, m = (1.7±0.6)×10-6 s-1.
Recall that (1.16)×10-5s-1 = (day)-1. Thus such physical time scales are in the range of some important biological time scales (Denman and Powell (1984); Dickey (1990)). Some general scale considerations for effective biological and physical interactions are discussed by Steele (1988), Nihoul and Djendi (1991) and Denman (1992).
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20 |
In this section we summarize some of the dynamical properties of a simple two-component biological system in zero spatial dimensions (e.g., Freedman (1980); Murray (1993)). We assume a predator-prey system with perfect grazing. In the absence of grazing, the prey can achieve an equilibrium value (carrying capacity) but the predator is depleted, e.g., a simple phytoplankton-zooplankton model with unlimited light and nutrient to support photosynthesis.
The relevant equations are (2.2) and (2.6) with nondimensionalization when desirable as in (2.10) but with u0 = 0. To keep all of the constants in the equations positive, we adopt the notation [^a]ij = -aij if aij < 0, and similarly for aij. The model equations under the above assumptions are, with a12 = -a21 and a22 = 0,
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Let Fi denote a steady state equilibrium field and introduce the notation
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(a) The null state
For instability analyses we assume d,e to be infinitesimal. Then linearization of (4.1a,b) about the null state (4.4a) decouples the two fields and f1 is unstable and f2 is stable. If the f2 perturbation is suppressed, f1 will evolve in time to the carrying capacity equilibrium C. If e ¹ 0, f2 will begin to grow when the second term on the rhs of (4.1b) exceeds the first term. Nondimensionalizing both state variables by M = C and choosing t0 = (a10)-1, eqs. (4.1) become (vid. (2.10c))
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(b) Carrying capacity
The carrying capacity equilibrium is governed by equations (4.5) with f2 º 0 and d = f1-1. The full d equation is
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To study grazing we nondimensionalize the time by t0 = (a21M)-1, with M as an arbitrary biomass density. Equations (4.1) become
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Next we present the solution for the nonlinear conversion of prey to predator for the limiting case that the grazing rate is much faster than growth and mortality rates. From equation (4.8) this limit is seen to require
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The effect of mortality of the predator can be treated
analytically via singular perturbation theory when the mortality
rate is small but finite. Thus we keep
a10 = [^(a)]11 = 0 but retain [^(a)]20 << 1 in (4.8)
as the perturbation parameter. The solution (4.10b) for the prey
is unaltered but the solution for the predator is now
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Consider for example f1 as a chemical nutrient and f2 as phytoplankton.
After consuming almost all the nutrient in the dimensional time
scale (a21M)-1 the phytoplankton slowly die off on
the dimensional time scale (a21G)-1, as shown on
figure 3(c). The plankton
f2 asymptotically approach zero identically but there
is a small residual amount of nutrient f1¥
which can be computed from the exact integral of the
system. Equation (4.10d) is now replaced by
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(d) N-P-Z Model
The nonlinear conversion results are extended to a three component system. The phytoplankton f1 = P are grazed by the zooplankton f2 = Z while they consume the nutrient f3 = N. We assume perfect grazing (aij = -aji) and neglect mortalities (aio = aii = 0). The non dimensional model equations, with all biomasses scaled by M and t0 = (a13M)-1, are
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The parameter b = a21 (a13)-1, the ratio of the grazing interaction coefficients, measures the relative rate of zooplankton depletion of phytoplankton to their growth rate via nutrient consumption. Addition of the three equations and an integration after eliminating P from (4.11b,c), yields two integrals of the system
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To facilitate the study of advective effects we seek relatively simple solutions to the zero-dimensional biological dynamics. Thus we will take the exact solution for b = 1 and approximate solutions for general b. For b = 1, (4.12c) integrates to
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If b = 0, the system reduces to the two components (N,P)
and the solution becomes
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From (4.11a) we note that the initial rate of plankton growth is given by P0 (N0 - bZ0). Thus if b << 1, N0 will first be converted to P via the 2-component process described by equation (4.12i), followed by a similar two-component conversion of N0 to Z but on the longer time scale b-1. For b > N0 Z0-1, P decreases immediately at t = 0 and cannot efficiently act as a conduit for the growth of Z. For b >> N0 Z0-1 Z can only convert P0, and asymptotically N¥ = N0, P¥ = 0, Z¥ = Z0 + P0. Thus rapid grazing is disadvantageous for the zooplankton.
An interesting case lies in the determination of asymptotic values in the range N0 Z0-1 > b > 1; for conditions (4.12f) this becomes b < O(e-1). There is an initial growth of plankton to a maximum value Pm with associated values Zm, Nm, at t = tm. From (4.11a) Nm = bZm when Pt = 0. From (4.12a,b,f)
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e | b | Zm | Nm | Pm | Z¥ | N¥ |
0.0010 | 5.0000 | 0.0827 | 0.4135 | 0.5058 | 0.7508 | 0.2512 |
0.0010 | 10.0000 | 0.0658 | 0.6579 | 0.2783 | 0.5008 | 0.5012 |
0.0010 | 15.0000 | 0.0513 | 0.7691 | 0.1816 | 0.3710 | 0.6310 |
0.0010 | 100.0000 | 0.0098 | 0.9775 | 0.0148 | 0.0687 | 0.9333 |
0.0100 | 5.0000 | 0.1214 | 0.6070 | 0.2916 | 0.6219 | 0.3981 |
0.0100 | 10.0000 | 0.0811 | 0.8111 | 0.1278 | 0.3890 | 0.6310 |
0.0100 | 15.0000 | 0.0592 | 0.8882 | 0.0726 | 0.2844 | 0.7356 |
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In this section we consider the occurrence of the biological processes of the previous section in the presence of a dynamically interesting flow field with deformation. We will present results for the competition between physical and biological effects for: the stability analyses, the nonlinear approach to carrying capacity or advective equilibria, and nonlinear grazing.
The parameter a = u0t0L-1 (equation (2.10c)) measures the relative importance of advective to biological effects if t0 is chosen as the characteristic time of the dominant biological process. As for equations (3.4) we choose v1 = u2 = 0 in (3.2) and set u0L-1 = u1, the deformation gradient of the flow field y = -u1xy. Equations (2.10), (2.11), (2.12) in nondimensional form appear as
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(a) Linearized instabilities of equilibria
Since a > 0 always, q = yeat represents exponential growth, and the presence of an initial spatial gradient of fi can significantly alter stability properties in the presence of the physical flow. Stable solutions can be rendered unstable and instabilities will occur with enhanced growth rates.
Linearity allows separability, thus
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For the null state (4.6) the instability of the prey is enhanced and the stability of the predator can be switched to instability if the advective supply rate exceeds the decay rate. Sufficient advection can also destabilize both the carrying capacity (4.7) and grazing states (4.9); the Lotka-Volterra model in the presence of deformation advection is always switched from neutral stability to instability. The quantitative conditions among the biological rate and interaction parameters and the deformation shear are given in Table 2.
State | a | Condition | Effect |
null | u1a10 | a > [^(a)]20 or u1 > a20(a10)-2 | predator |
unstable | |||
carrying | u1a10 | a > 1 u1 > (a10)-1 | instability |
capacity | |||
grazing | u1[^a]20 | 2a > [^(a)]11 u1 > [^a]11(a21[^a]20)-1 | instability |
Okubo (1980, Chapter 10) reports a stabilization of the
Lotka-Volterra model when the predator and prey tend to
migrate towards a central favorable region with constant
velocities in the presence also of diffusion.
(b) Carrying capacity vs. advective equilibria
Here we consider the behavior of the one component biological system, e.g., phytoplankton (4.7), in the presence of the deformation advection of equation (5.1). The solutions are now given by (4.7c,d) with d0, f10 replaced by functions of q as in (5.1c).
First we generalize the stability analysis of equation (5.2) for case g0 = 0, g2 = 1. Now M = C and L = Cc2-1. The nonlinear solution for the departure from equilibrium is
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The limit of pure advection is given by d = d directly by (5.3c) or equivalently by setting et = 1 in (5.3a) but retaining eat. The limit of pure biology is given by a = 0. Both of these limits are plotted on figure 4(a). Advection is plotted for a = 1, i.e., with equal advective and biological time scales. To interpret these and subsequent plots note that at t = 0, d = y, so that a curve emanating from a point d* on the ordinate axis represents d(y = d*,t). The biological behavior is of course identical to that shown on figure 3(a). The advective solutions for y > 0 amplify indefinitely but for y < 0 reach the limiting value d = -1 at time t-1 = ln(-y-1) and remain at that value thereafter. This behavior is consistent with the deformation flow (vid. figure 2(b)) ultimately advecting in fluid with no phytoplankton for y < 0 but advecting in fluid with an ever increasingly dense population for y > 0.
Figure 4. Carrying capacity vs. advective equilibria: (a (above) ) Pure advection (dashed) and pure biology (solid); (b (below) ) dependance on relative strength of advection [Click on components of 4b for increased resolution].
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The general interactive solution is illustrated on figure 4(b) for values of
a = (0.1,1,10) which range from
relatively weak to strong advective effects and span all qualitative
behaviors.
The solutions equation (5.3a) have maxima at t = tm for
both positive and negative y but only for a range of
values. The times at which maxima and limiting values are
reached are
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Asymptotically in time an excess initial population always approaches the carrying capacity equilibrium but a deficit population approaches the advective null equilibrium.
Examination of figure 4(b) shows some interesting effects. Frontogenesis occurs, ultimately producing a very sharp front of unit strength. For large a and positive y, advection dominates until the maximum is reached at tm and a much stronger but broader front is present. For large a and negative y advection dominates with but little biological modification before t-1. For small a advection has little effect on the approach to the biological equilibrium for positive y. For negative y and small a, however, the solutions are dominated by almost pure biological behavior for a long time, i.e., until tm >> 1. Biological equilibrium is very nearly achieved whence advection suddenly sweeps away the population. This is because (equations (5.3)) for a << 1, tm » t-1. The curve emanating at y = -.20 for a = 0.10 which is indistinguishable from zero at t = 8 has the associated values tm = 15.04, t1 = 16.09.
The next problem deals with the identical dynamics as the previous one but for the initial condition introduces a finite frontal width L across which the biomass density changes from zero to a maximum value of F. We retain the biomass scaling M = C as introduced prior to equation (5.3a). The initial condition is now taken as
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The approach to equilibrium is now given by
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The range of qualitative behavior of solution (5.4) as a function of the relative rate and frontal strength parameters (a,g) is illustrated on figure 5. Figure 5(a) presents the pure biological and pure advective limits. Figures 5(b,c) are for an initial frontal strength (2g) somewhat larger than the carrying capacity and Figures 5(d,e) show the behavior for a weaker (stronger) front. Figure 5(c) illustrates a small a behavior analogous to that on figure 4(b).
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Figure 5. As for Fig. 4 but for a finite front: (a) Pure advection (dashed) and pure biology (solid); (b) and (c) initial frontal strength somewhat larger than carrying capacity and show, respectively, the short and long time behavior; (d) initial frontal strength smaller than carrying capacity; (e) initial frontal strength much larger than carrying capacity.
(c)Grazing with advection
The effects of advection on grazing are particularly interesting since advective supply of nutrients can dominate the qualitative and quantitative behavior of the biological dynamics. We retain the deformation flow field of equation (5.1). For definiteness of interpretation, we can consider solutions in the half-plane y > 0 as representing an infinitely deep ocean with sea surface at y = 0. Thus advection can be regarded as bringing material from the deep sea into the surface region. The models remain of course highly ideaized and we do not intend to imply any direct realistic oceanic relevance.
The advective process introduces a new advective equilibrium state. Introducing the biology of equations (4.10) into equations (5.1a,b) and setting [(¶)/(¶t)] = [(¶)/(¶x)] = 0 yields
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Figure 6. Advective equilibrium profiles [alpha = .1 (solid), 1 (dash-dot), 10 (dashed)]. The A dependence is indicated by where the alpha triplets intersect at y = 1. For A = (.1,1,10), the intersections at y = 1 are at N = (.9,.5,.09), respectively.
We need consider only equations (4.11)-(4.13) since they contain
the dynamics of (4.10) for the case of
b = 0. For all solutions
we will take the initial plankton fields as a small uniform
background constant. The initial nutrient field will be a
linear increase of N with depth y, and interest will be
restricted to order unity depths. Thus
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For the two-component NP system figure 7 illustrates the dependence of the grazing on the initial condition (e) and the advective parameter (a). Figure 7(a) shows an initial advective growth of P followed by a complete depletion via grazing. It is important to note that after some times the solution is independent of the value of the initial phytoplankton biomass, which simply controls the amplitude and time of occurrence of the maximum of N. Figures 7(b,c) for fixed e = .001 illustrates the dependence on the advection rate. Rapid advection results in an early, large amplitude maximum in N and an early rapid growth of P asymptotically.
Figure 7. NP conversion: (a) Dependence on initial conditions; (b) weak and moderate advection [N = solid, P = dashed]; (c) moderate and strong advection [alpha = 1.0 (solid), 2.5 (dash-dot), 10 (dashed)], as a increases, the maximum in N increases and the conversion to P occurs earlier; (d) grazing and advection rates [y = 0.5 (dashed), 1.0 (solid)], as time increases local grazing stops.
Recall that if there were no planktons (Z = P º 0)
the purely advective solution for the inert passive
nutrient would be given by (5.6b) (vid equation (3.4b)). In the
advective NP system
(b = 0) for large t
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The behavior of the three-component NPZ system for equal
grazing rates
(b = 1) is shown on figures 8(a,b) for the same
values of e and a and the same scales
as figures 7(b,c) for comparison. As indicated by
equation (4.12h), the advected nutrient is now asymptotically
completely converted to Z with ultimately no
observable N or P. The rate of the processes again
increases with increasing a, as do the amplitudes of the
successive maximum values of N and P. For b >> 1,
1 ³ eb, the fraction of nutrient effectively
utilized by P and Z and its partioning between them, is
given by (4.13c). N and Z will now both be observed
to grow exponentially after the initial adjustment time. In
this model, rapid grazing by zooplankton leads to a
smaller Z biomass than slow grazing.
Figure 8. NPZ conversions: (a) Weak and moderate advection [N = solid, P = dashed, Z = dash-dot]; (b) moderate and strong advection, maxima in N and P increase with increasing a and the rapid growth of Z occurs earlier.
This study presents a general theoretical structure for the analysis of advective effects on biological dynamics in the sea. It is based upon the mathematical theory of characteristics and, in the domain of the parameter s, involves the zero-dimensional local biological dynamics, as well as the Lagrangian trajectories of the fluid particles. The s-domain initial value problems solved here were for the case that s was identified with the time t, and involved the specification of space-wise initial fields at t = 0. More general problems are possible and should be considered.
A kinematical analysis of the flow field was introduced and the effects of divergence, vorticity, stretching and shearing deformations on local gradients of biological state variables were discussed. The stretching deformation flow, which contains frontogenesis and frontolysis effects that contract and dilate gradients, was selected for the present study. The biological dynamical system included net birth or mortality, self-interactions and coupled field interactions. Biological processes subjected to advection included: the approach to local equilibria; the stability or instability of equilibrium states for one, two, or three-component systems; and nonlinear grazing conversions for NP and NPZ models. Further research should be directed towards additional and more realistic flow structures (vorticity, divergence, three dimensions, time-dependence, and nonlocal circulation structures, etc.) as well as additional and more realistic biology (Michaelis-Menten grazing, light limitation, behavior, etc.).
Advection by a deformation shear field in the presence of local gradients of the biological state variables was found capable of destabilizing null, carry-capacity and grazing equilibria and the velocity shear required was obtained in terms of the biological growth (death) rates and interaction coefficients. The competition between local biological and advective equilibria in the presence of frontogenesis was illustrated both for a simple deformation field flow and for a front of finite width. For an NPZ model the concept of advective-grazing equilibria was introduced and exemplified. For the cases of initial small background distribution of planktons in the presence of a deep ocean reservoir of nutrient the growth and conversion of planktons were calculated including the asymptotic in time partitioning of the advective nutrient input among the NPZ variables. At large times, P does not survive and Z is most successful by slow rather than rapid grazing.
These first results indicate the utility of the approach and provide some insight for further research. Deformation fields occur over a range of scales in the ocean and in other fluids in which dynamic tracers are of interest for a variety of reaction and nonconservative dynamics. Biological rates and physical advection times of interest in the ocean range from hours to days to weeks to months and seasons. A comprehensive review of time scales in the context of this theory could serve both to constrain the theory and guide developments. In addition to the direct extensions discussed in the preceding paragraphs it would be of interest to carry out first studies including new processes such as chaotic trajectories, mixing, swimming and small-scale encounter dynamics. The formulation of more general initial value problems in the s-domain should be guided not only by direct biological considerations but also by the mathematical structure of the theory of characteristics.
This research was stimulated by several interesting, important and enjoyable scientific discussions with Prof. Brian J. Rothschild. I thank Profs. A. Denny Kirwan, Jr. and Eileen E. Hofmann and Drs. Patrick J. Haley, Jr. and Dennis J. McGillicuddy for helpful scientific and mathematical comments. I am grateful to Mr. Wayne G. Leslie for his essential contribution to this study by the performance of sensitivity analyses and the preparation of figures. It is a pleasure to thank Dr. Nadia Pinardi for the hospitality of Istituto per lo studio delle Metodologie Geofisiche Ambientali (CNR-IMGA) during a sabbatical visit. The preparation of the manuscript by Ms. Marsha A. Glass and Mrs. Renate D'Arcangelo is very much appreciated. This research was supported in part by the Office of Naval Research under grant N00014-95-1-0371 to Harvard University.
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